Simple Sequence Repeat or SSR marker is microsatellite DNA marker cover almost entire genome with 18 to 25 of repetitive sequences of Primer, SSR marker initiate by extracting DNA for PCR amplification using fluorescent or regular primers and detect amplified DNA fragments with agarose gel electrophoresis to compare bands patterns, SSR marker consider co-dominant inheritance marker with locus specific and multiple alleles and highly polymorphism with stability and reproducibility, SSR marker have scarcity polymorphic loci and low efficiency for massive samples because it require prior knowledge of DNA sequence at both ends of repeated motif therefore SSR marker consider expensive and time consuming marker, SSR marker use in genetic diversity studies and germplasm characterization and DNA fingerprinting profiling and genetic maps (Watch Related Video in #geneticteacher)
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